BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B12LP1|AL424921
(998 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1600 1931 0.0
3x_Contig1728 961 0.0
>3x_Contig1600
Length = 9359
Score = 1931 bits (973), Expect = 0.0
Identities = 991/997 (99%), Gaps = 1/997 (0%)
Strand = Plus / Plus
Query: 3 tctcacacaacatattgggamtgttttctttacttctgttttgaattacgacgcaaatta 62
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3047 tctcacacaacatattgggactgttttctttacttctgttttgaattacgacgcaaatta 3106
Query: 63 aatttcccttttgaaaaaattttcaaatgaaaaaaagctgtccagactctggtgatatat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3107 aatttcccttttgaaaaaattttcaaatgaaaaaaagctgtccagactctggtgatatat 3166
Query: 123 aatcagaatacggaaagccatatttttcaacttacaactttcacagcagtagtacggtac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3167 aatcagaatacggaaagccatatttttcaacttacaactttcacagcagtagtacggtac 3226
Query: 183 tgttcaattctactgtataactttgctcaaccaaccaaagcaaacgacacataaccaaaa 242
|||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3227 tgttaaattataatgtataactttgctcaaccaaccaaagcaaacgacacataaccaaaa 3286
Query: 243 atgaagtacattcaaactgaccaagtcctagatgtcccagaaggtgttaccgttcaaatc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3287 atgaagtacattcaaactgaccaagtcctagatgtcccagaaggtgttaccgttcaaatc 3346
Query: 303 agatccagaataatcaaggttactggaccaagaggtgtcttgactaagaacttgaagcac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3347 agatccagaataatcaaggttactggaccaagaggtgtcttgactaagaacttgaagcac 3406
Query: 363 atcgatgttaccttcaccaaggtctctaacagacaaattaagatcaccgtccacaacggt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3407 atcgatgttaccttcaccaaggtctctaacagacaaattaagatcaccgtccacaacggt 3466
Query: 423 gacagaaagcacgttgctgctttgagaactgttaagtctttgatttctaacttgatcact 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3467 gacagaaagcacgttgctgctttgagaactgttaagtctttgatttctaacttgatcact 3526
Query: 483 ggtgtcaccaagggttacaagtacaagttgagatacgtttacgcgcatttcccaatcaac 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3527 ggtgtcaccaagggttacaagtacaagttgagatacgtttacgcgcatttcccaatcaac 3586
Query: 543 gttaacgtcattgaaaaggacggtgctaagttcatcgaaatcagaaacttcttgggtgac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3587 gttaacgtcattgaaaaggacggtgctaagttcatcgaaatcagaaacttcttgggtgac 3646
Query: 603 aagaaggtcagagaagttccagtcagagaaggtgtttctgttgacttctctaccaaccaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3647 aagaaggtcagagaagttccagtcagagaaggtgtttctgttgacttctctaccaaccaa 3706
Query: 663 aaggacgaaatcgtcttgtctggtaactctgttgaaaacgtttcccaaaacgctgctgac 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3707 aaggacgaaatcgtcttgtctggtaactctgttgaaaacgtttcccaaaacgctgctgac 3766
Query: 723 atccaacaaatctgtcgtgttagaaacaaggatattcgtaaattcttggatggtatctat 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3767 atccaacaaatctgtcgtgttagaaacaaggatattcgtaaattcttggatggtatctat 3826
Query: 783 gtctctgaaaagggtctgatcgaagaagaagaataagcgaaccaaaatttcggatacttt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3827 gtctctgaaaagggtctgatcgaagaagaagaataagcgaaccaaaatttcggatacttt 3886
Query: 843 tgacacgttactgtacactagcgaggaagacgttctcccctcagaggtggatgttctata 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3887 tgacacgttactgtacactagcgaggaagacgttctcccctcagaggtggatgttctata 3946
Query: 903 taagtagatagattcagattatgtactttgtctttctctttgccatcttccgataatcaa 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3947 taagtagatagattcagattatgtactttgtctttctctttgccatcttccgataatcaa 4006
Query: 963 gtatcggaagratacgataggggg-aacgttgctaga 998
|||||||||| ||||||||||||| ||||||||||||
Sbjct: 4007 gtatcggaagaatacgatagggggaaacgttgctaga 4043
>3x_Contig1728
Length = 20685
Score = 961 bits (484), Expect = 0.0
Identities = 553/576 (96%)
Strand = Plus / Plus
Query: 243 atgaagtacattcaaactgaccaagtcctagatgtcccagaaggtgttaccgttcaaatc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 19833 atgaagtacattcaaactgaccaagtcctagatgtcccagaaggtgttaccgtccaaatc 19892
Query: 303 agatccagaataatcaaggttactggaccaagaggtgtcttgactaagaacttgaagcac 362
|||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 19893 agatccagaaacatcaaggttactggtccaagaggtgttttgactaagaacttgaagcac 19952
Query: 363 atcgatgttaccttcaccaaggtctctaacagacaaattaagatcaccgtccacaacggt 422
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 19953 atcgatgttaccttcaccaaggtctctaacagacaaatcaagatcaccgttcacaacggt 20012
Query: 423 gacagaaagcacgttgctgctttgagaactgttaagtctttgatttctaacttgatcact 482
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 20013 gacagaaagcacgttgctgctttgagaactgtcaagtctttgatttccaacttgatcact 20072
Query: 483 ggtgtcaccaagggttacaagtacaagttgagatacgtttacgcgcatttcccaatcaac 542
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20073 ggtgttaccaagggttacaagtacaagttgagatacgtttacgcgcatttcccaatcaac 20132
Query: 543 gttaacgtcattgaaaaggacggtgctaagttcatcgaaatcagaaacttcttgggtgac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20133 gttaacgtcattgaaaaggacggtgctaagttcatcgaaatcagaaacttcttgggtgac 20192
Query: 603 aagaaggtcagagaagttccagtcagagaaggtgtttctgttgacttctctaccaaccaa 662
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 20193 aagaaggtcagagaagttccagtcagagatggtgtttctgttgacttctccaccaaccaa 20252
Query: 663 aaggacgaaatcgtcttgtctggtaactctgttgaaaacgtttcccaaaacgctgctgac 722
||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 20253 aaggacgaaattgtcttgtctggtaactccgtcgaaaacgtttcccaaaacgctgctgac 20312
Query: 723 atccaacaaatctgtcgtgttagaaacaaggatattcgtaaattcttggatggtatctat 782
|||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 20313 atccaacaaatctgtcgtgtcagaaacaaggatatccgtaagttcttggatggtatctac 20372
Query: 783 gtctctgaaaagggtctgatcgaagaagaagaataa 818
|| || ||||||||||| ||||| ||||||||||||
Sbjct: 20373 gtttccgaaaagggtctaatcgaggaagaagaataa 20408
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8763
Number of Sequences: 1807
Number of extensions: 8763
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 2
length of query: 998
length of database: 10,358,551
effective HSP length: 16
effective length of query: 982
effective length of database: 10,329,639
effective search space: 10143705498
effective search space used: 10143705498
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)